The GLIMMIX Procedure
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Overview
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Getting Started
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Syntax
PROC GLIMMIX Statement BY Statement CLASS Statement CONTRAST Statement COVTEST Statement EFFECT Statement ESTIMATE Statement FREQ Statement ID Statement LSMEANS Statement LSMESTIMATE Statement MODEL Statement NLOPTIONS Statement OUTPUT Statement PARMS Statement RANDOM Statement SLICE Statement STORE Statement WEIGHT Statement Programming Statements User-Defined Link or Variance Function
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Details
Generalized Linear Models Theory Generalized Linear Mixed Models Theory GLM Mode or GLMM Mode Statistical Inference for Covariance Parameters Satterthwaite Degrees of Freedom Approximation Empirical Covariance (Sandwich) Estimators Exploring and Comparing Covariance Matrices Processing by Subjects Radial Smoothing Based on Mixed Models Odds and Odds Ratio Estimation Parameterization of Generalized Linear Mixed Models Response-Level Ordering and Referencing Comparing the GLIMMIX and MIXED Procedures Singly or Doubly Iterative Fitting Default Estimation Techniques Default Output Notes on Output Statistics ODS Table Names ODS Graphics
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Examples
Binomial Counts in Randomized Blocks Mating Experiment with Crossed Random Effects Smoothing Disease Rates; Standardized Mortality Ratios Quasi-likelihood Estimation for Proportions with Unknown Distribution Joint Modeling of Binary and Count Data Radial Smoothing of Repeated Measures Data Isotonic Contrasts for Ordered Alternatives Adjusted Covariance Matrices of Fixed Effects Testing Equality of Covariance and Correlation Matrices Multiple Trends Correspond to Multiple Extrema in Profile Likelihoods Maximum Likelihood in Proportional Odds Model with Random Effects Fitting a Marginal (GEE-Type) Model Response Surface Comparisons with Multiplicity Adjustments Generalized Poisson Mixed Model for Overdispersed Count Data Comparing Multiple B-Splines Diallel Experiment with Multimember Random Effects Linear Inference Based on Summary Data
- References
Odds Ratios in Multinomial Models
The GLIMMIX procedure fits two kinds of models to multinomial data. Models with cumulative link functions apply to ordinal data, and generalized logit models are fit to nominal data. If you model a multinomial response with LINK=CUMLOGIT or LINK=GLOGIT, odds ratio results are available for these models.
In the generalized logit model, you model baseline category logits. By default, the GLIMMIX procedure chooses the last category as the reference category. If your nominal response has 
categories, the baseline logit for category 
is
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and
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As before, suppose that the two conditions to be compared are identified with subscripts 
and 
. The log odds ratio of outcome versus for the two conditions is then
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Note that the log odds ratios are again differences on the scale of the linear predictor, but they depend on the response category. The GLIMMIX procedure determines the estimable functions whose differences represent log odds ratios as discussed previously but produces separate estimates for each nonreference response category.
In models for ordinal data, PROC GLIMMIX models the logits of cumulative probabilities. Thus, the estimates on the linear scale represent log cumulative odds. The cumulative logits are formed as
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so that the linear predictor depends on the response category only through the intercepts (cutoffs) 
. The odds ratio comparing two conditions represented by linear predictors 
and 
is then
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and is independent of category.