The SEQDESIGN Procedure |

This example requests three 4-stage Whitehead’s triangular designs for normally distributed statistics. Each design has a one-sided alternative hypothesis with early stopping to reject or accept the null hypothesis . Note that Whitehead’s triangular designs are different from unified family triangular designs.

Suppose that a clinic is conducting a study of the effect of a new cancer treatment. The study consists of exposing mice to a carcinogen and randomly assigning them to either the control group or the treatment group. The event of interest is death from cancer induced by the carcinogen, and the response is the time from randomization to death.

Following the derivations in the section Test for Two Survival Distributions with a Log-Rank Test, the hypothesis with an alternative hypothesis is used, where is the hazard ratio between the treatment group and the control group.

Also suppose that from past experience, the median survival time for the control group is days, and the study wants to detect a days’ median survival time with a power in the trial. Assuming exponential survival functions for the two groups, the hazard rates can be computed from

where .

Thus, with and , the hazard ratio , and the alternative reference is

The following statements invoke the SEQDESIGN procedure and specify three Whitehead’s triangular designs:

ods graphics on; proc seqdesign altref=0.693147 bscale=score plots=combinedboundary ; BoundaryKeyNone: design nstages=4 method=whitehead boundarykey=none alt=upper stop=both alpha=0.05 beta=0.20 ; BoundaryKeyAlpha: design nstages=4 method=whitehead boundarykey=alpha alt=upper stop=both alpha=0.05 beta=0.20 ; BoundaryKeyBeta: design nstages=4 method=whitehead boundarykey=beta alt=upper stop=both alpha=0.05 beta=0.20 ; run; ods graphics off;

Whitehead methods with early stopping to reject or accept the null hypothesis create boundaries that approximately satisfy the Type I and Type II error probability specification. The BOUNDARYKEY=NONE option specifies no adjustment to the boundary value at the final stage to maintain either a Type I or a Type II error probability level.

The "Design Information" table in Output 78.7.1 displays design specifications and maximum information. Note that with the BOUNDARYKEY=NONE option, the derived errors and are not the same as the specified errors and .

The SEQDESIGN Procedure

Design: BoundaryKeyNone

Design Information | |
---|---|

Statistic Distribution | Normal |

Boundary Scale | Score |

Alternative Hypothesis | Upper |

Early Stop | Accept/Reject Null |

Method | Whitehead |

Boundary Key | None |

Alternative Reference | 0.693147 |

Number of Stages | 4 |

Alpha | 0.05071 |

Beta | 0.19771 |

Power | 0.80229 |

Max Information (Percent of Fixed Sample) | 129.6815 |

Max Information | 16.70639 |

Null Ref ASN (Percent of Fixed Sample) | 62.48184 |

Alt Ref ASN (Percent of Fixed Sample) | 73.82535 |

The "Method Information" table in Output 78.7.2 displays the derived and errors and the derived drift parameter. The derived errors and are not exactly the same as the specified errors and with the BOUNDARYKEY=NONE option.

The "Boundary Information" table in Output 78.7.3 displays information level, alternative reference, and boundary values. With the specified BOUNDARYSCALE=SCORE option, the alternative reference and boundary values are displayed with the score statistics scale.

Boundary Information (Score Scale) Null Reference = 0 |
|||||
---|---|---|---|---|---|

_Stage_ | Alternative | Boundary Values | |||

Information Level | Reference | Upper | |||

Proportion | Actual | Upper | Beta | Alpha | |

1 | 0.2500 | 4.176597 | 2.89500 | -0.95755 | 4.78775 |

2 | 0.5000 | 8.353195 | 5.78999 | 1.91510 | 5.74530 |

3 | 0.7500 | 12.52979 | 8.68499 | 4.78775 | 6.70285 |

4 | 1.0000 | 16.70639 | 11.57998 | 7.66039 | 7.66039 |

With the specified ODS GRAPHICS ON statement, a detailed boundary plot with the rejection and acceptance regions is displayed, as shown in Output 78.7.4.

The second design uses the BOUNDARYKEY=ALPHA option to adjust the boundary value at the final stage to maintain the Type I error probability level.

The "Design Information" table in Output 78.7.5 displays design specifications and the derived maximum information. Note that with the BOUNDARYKEY=ALPHA option, the specified Type I error probability is maintained.

The SEQDESIGN Procedure

Design: BoundaryKeyAlpha

Design Information | |
---|---|

Statistic Distribution | Normal |

Boundary Scale | Score |

Alternative Hypothesis | Upper |

Early Stop | Accept/Reject Null |

Method | Whitehead |

Boundary Key | Alpha |

Alternative Reference | 0.693147 |

Number of Stages | 4 |

Alpha | 0.05 |

Beta | 0.20044 |

Power | 0.79956 |

Max Information (Percent of Fixed Sample) | 129.9894 |

Max Information | 16.70639 |

Null Ref ASN (Percent of Fixed Sample) | 62.6302 |

Alt Ref ASN (Percent of Fixed Sample) | 74.00064 |

The "Method Information" table in Output 78.7.6 displays the specified and derived and errors and the derived drift parameter. The derived Type I error probability is the same as the specified and the derived Type II error probability is not the same as the specified with the BOUNDARYKEY=ALPHA option.

The "Boundary Information" table in Output 78.7.7 displays information level, alternative reference, and boundary values.

Boundary Information (Score Scale) Null Reference = 0 |
|||||
---|---|---|---|---|---|

_Stage_ | Alternative | Boundary Values | |||

Information Level | Reference | Upper | |||

Proportion | Actual | Upper | Beta | Alpha | |

1 | 0.2500 | 4.176597 | 2.89500 | -0.95755 | 4.78775 |

2 | 0.5000 | 8.353195 | 5.78999 | 1.91510 | 5.74530 |

3 | 0.7500 | 12.52979 | 8.68499 | 4.78775 | 6.70285 |

4 | 1.0000 | 16.70639 | 11.57998 | 7.81300 | 7.81300 |

With the specified ODS GRAPHICS ON statement, a detailed boundary plot with the rejection and acceptance regions is displayed, as shown in Output 78.7.8.

The third design specifies the BOUNDARYKEY=BETA option to derive the boundary values to maintain the Type II error probability level .

The "Design Information" table in Output 78.7.9 displays design specifications and the derived maximum information. Note that with the BOUNDARYKEY=BETA option, the specified Type II error probability is maintained.

The SEQDESIGN Procedure

Design: BoundaryKeyBeta

Design Information | |
---|---|

Statistic Distribution | Normal |

Boundary Scale | Score |

Alternative Hypothesis | Upper |

Early Stop | Accept/Reject Null |

Method | Whitehead |

Boundary Key | Beta |

Alternative Reference | 0.693147 |

Number of Stages | 4 |

Alpha | 0.05011 |

Beta | 0.2 |

Power | 0.8 |

Max Information (Percent of Fixed Sample) | 129.9364 |

Max Information | 16.70639 |

Null Ref ASN (Percent of Fixed Sample) | 62.60462 |

Alt Ref ASN (Percent of Fixed Sample) | 73.97042 |

The "Method Information" table in Output 78.7.10 displays the and errors and the derived drift parameter. The derived Type II error probability is the same as the specified and the derived Type I error probability is not the same as the specified with the BOUNDARYKEY=BETA option.

The "Boundary Information" table in Output 78.7.11 displays information level, alternative reference, and boundary values.

Boundary Information (Score Scale) Null Reference = 0 |
|||||
---|---|---|---|---|---|

_Stage_ | Alternative | Boundary Values | |||

Information Level | Reference | Upper | |||

Proportion | Actual | Upper | Beta | Alpha | |

1 | 0.2500 | 4.176597 | 2.89500 | -0.95755 | 4.78775 |

2 | 0.5000 | 8.353195 | 5.78999 | 1.91510 | 5.74530 |

3 | 0.7500 | 12.52979 | 8.68499 | 4.78775 | 6.70285 |

4 | 1.0000 | 16.70639 | 11.57998 | 7.78899 | 7.78899 |

With the specified ODS GRAPHICS ON statement, a detailed boundary plot with the rejection and acceptance regions is displayed, as shown in Output 78.7.12.

With the PLOTS=COMBINEDBOUNDARY option, a combined plot of group sequential boundaries for all designs is displayed, as shown in Output 78.7.13. It shows that three designs are similar, with a slightly smaller boundary value at the final stage for the design with the BOUNDARYKEY=NONE option.

The following statements invoke the SEQDESIGN procedure and specify the SAMPLESIZE statement to derive required sample sizes for a log-rank test comparing two survival distributions for the treatment effect (Jennison and Turnbull 2000 pp. 77–79; Whitehead 1997, pp. 36–39):

proc seqdesign altref=0.693147 bscale=score ; BoundaryKeyAlpha: design nstages=4 method=whitehead boundarykey=alpha alt=upper stop=both alpha=0.05 beta=0.20 ; samplesize model=twosamplesurvival ( nullhazard=0.03466 accrate=10); run;

The design is identical to the previous design with the BOUNDARYKEY=ALPHA option except with the addition of the sample size computation.

The "Sample Size Summary" table in Output 78.7.14 displays parameters for the sample size computation. Since the ACCTIME= option is not specified for the accrual time, the minimum and maximum accrual times are derived for the specified accrual rate.

The SEQDESIGN Procedure

Design: BoundaryKeyAlpha

Sample Size Summary | |
---|---|

Test | Two-Sample Survival |

Null Hazard Rate | 0.03466 |

Hazard Rate (Group A) | 0.01733 |

Hazard Rate (Group B) | 0.03466 |

Hazard Ratio | 0.5 |

log(Hazard Ratio) | -0.69315 |

Reference Hazards | Alt Ref |

Accrual Rate | 10 |

Min Accrual Time | 6.682556 |

Min Sample Size | 66.82556 |

Max Accrual Time | 25.40111 |

Max Sample Size | 254.0111 |

Max Number of Events | 66.82556 |

If the ACCTIME=20 option is specified in the SAMPLESIZE statement, the "Sample Size Summary" table in Output 78.7.15 also displays the follow-up time and maximum sample size with the specified accrual time.

The SEQDESIGN Procedure

Design: WhiteheadKeyAlpha

Sample Size Summary | |
---|---|

Test | Two-Sample Survival |

Null Hazard Rate | 0.03466 |

Hazard Rate (Group A) | 0.01733 |

Hazard Rate (Group B) | 0.03466 |

Hazard Ratio | 0.5 |

log(Hazard Ratio) | -0.69315 |

Reference Hazards | Alt Ref |

Accrual Rate | 10 |

Accrual Time | 20 |

Follow-up Time | 6.474376 |

Total Time | 26.47438 |

Max Number of Events | 66.82556 |

Max Sample Size | 200 |

Expected Sample Size (Null Ref) | 161.5941 |

Expected Sample Size (Alt Ref) | 172.4693 |

The "Number of Events (D) and Sample Sizes (N)" table in Output 78.7.16 displays the required time at each stage, in both fractional and integer numbers. The derived times under the heading "Fractional Time" are not integers. These times are rounded up to integers under the heading "Ceiling Time." The table also displays the numbers of events and sample sizes at each stage.

Numbers of Events (D) and Sample Sizes (N) Two-Sample Log-Rank Test |
||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|

_Stage_ | Fractional Time | Ceiling Time | ||||||||||||||

D | D(Grp 1) | D(Grp 2) | Time | N | N(Grp 1) | N(Grp 2) | Information | D | D(Grp 1) | D(Grp 2) | Time | N | N(Grp 1) | N(Grp 2) | Information | |

1 | 16.71 | 5.82 | 10.89 | 11.9867 | 119.87 | 59.93 | 59.93 | 4.1766 | 16.74 | 5.83 | 10.91 | 12 | 120.00 | 60.00 | 60.00 | 4.1854 |

2 | 33.41 | 11.84 | 21.57 | 17.3585 | 173.58 | 86.79 | 86.79 | 8.3532 | 35.73 | 12.68 | 23.04 | 18 | 180.00 | 90.00 | 90.00 | 8.9322 |

3 | 50.12 | 18.01 | 32.11 | 21.7480 | 200.00 | 100.00 | 100.00 | 12.5298 | 51.07 | 18.37 | 32.70 | 22 | 200.00 | 100.00 | 100.00 | 12.7667 |

4 | 66.83 | 24.46 | 42.37 | 26.4744 | 200.00 | 100.00 | 100.00 | 16.7064 | 68.55 | 25.14 | 43.41 | 27 | 200.00 | 100.00 | 100.00 | 17.1378 |

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