CDISC SDTM

Purpose

CDISC SDTM defines a standard structure for data tabulations that are submitted as part of a product application to a regulatory authority such as the FDA. The data sets and columns required for a regulatory application are not prescribed by the standard. Instead, these requirements are based on the trial protocol and discussions with the regulatory authority in charge of reviewing the submission. Therefore, any SAS Clinical Standards Toolkit standard, including any CDISC SDTM standard, is only a representative sample or template.

Release Dates

CDISC SDTM 3.1.2
  • CDISC SDTM Model, Final Version 1.2, November 12, 2008
  • CDISC SDTM Implementation Guide, Final Version 3.1.2, November 12, 2008
CDISC SDTM 3.1.3
  • CDISC SDTM Model, Final Version 1.3, July 16, 2012
  • CDISC SDTM Implementation Guide, Final Version 3.1.3, July 16, 2012
CDISC SDTM 3.2
  • Study Data Tabulation Model, Final Version 1.4, November 26, 2013
  • Study Data Tabulation Model Implementation Guide: Human Clinical Trials, Final Version 3.2, November 26, 2013
  • Study Data Tabulation Model Implementation Guide: Associated Persons, Final Version 1.0, December 12, 2013
  • Study Data Tabulation Model Implementation Guide for Medical Devices (SDTMIG-MD), Provisional Version 1.0, December 4, 2012

Description

CDISC standards, including SDTM, allow for the inclusion and exclusion of some columns. (For example, timing variables can be included or excluded.) In addition, CDISC standards do not specify a length for most columns. Therefore, any implementation of a CDISC standard requires interpretation of that standard, which might lead to differences in the implementation of that standard. Reference standards are derived based on internal conventions and experiences, and discussions with regulatory authorities.
The domain and column metadata that constitute the SAS representation of each CDISC SDTM standard are derived from the global standards library in these formats:
Sample reference_tables Record (CDISC SDTM 3.2)
Column Name
Column Value
SASref
REFMETA
Table
AE
Label
Adverse Events
Class
Events
XmlPath
.../transport/ae.xpt
XmlTitle
Adverse Events SAS transport file
Structure
One record per adverse event per subject
Purpose
Tabulation
Keys
STUDYID USUBJID AEDECOD AESTDTC
State
Final
Date
2013-11-26
Standard
CDISC-SDTM
StandardVersion
3.2
Standardref
SDTMIG 3.2, section 6.2
Comment
“The Adverse Events dataset includes clinical data describing "any untoward medical occurrence in a patient or clinical investigation subject administered a pharmaceutical product and which does not necessarily have to have a causal relationship with this treatment" (ICH E2A). The events included in the AE dataset should be consistent with the protocol requirements. Adverse events may be captured either as free text or via a pre-specified list of terms.”
Sample reference_columns Record (CDISC SDTM 3.2)
Column Name
Column Value
sasref
REFMETA
table
AE
column
AESEV
label
Severity/Intensity
order
26
type
C
length
20
displayformat
xmldatatype
text
xmlcodelist
AESEV
core
Perm
origin
role
RecordQualifier
term
(AESEV)
algorithm
qualifiers
UPPERCASE
standard
CDISC-SDTM
standardversion
3.2
standardref
comment
The severity or intensity of the event. Examples: MILD, MODERATE, SEVERE.
The SAS Clinical Standards Toolkit CDISC SDTM reference standard provides metadata and code to validate the structure and content of the SDTM domains.
To enable validation, supplemental files supporting SDTM validation processes include these global standards library files:
  • The Validation Master data set in the validation/control folder contains the superset of checks validating the domain structure and content for each specific SDTM version.
  • The Messages data set in the messages folder provides error messaging for all Validation Master checks.
  • SAS code in the macros folder provides code specific to SDTM that augments code that is provided in the primary SAS Clinical Standards Toolkit autocall library (!sasroot/cstframework/sasmacro).
It is this set of files, in whole or in part, that defines each of the CDISC SDTM reference standards.

CDISC SDTM 3.1.1 Reference Standard

Note: Effective with SAS Clinical Standards Toolkit 1.7, the CDISC SDTM 3.1.1 reference standard is no longer supported. The SDTM 3.1.1 subfolder hierarchy has been removed from the global standards library and the sample study library.

CDISC SDTM 3.1.2 Reference Standard

Overview of the CDISC SDTM 3.1.2 Domains

The SAS Clinical Standards Toolkit representation of the CDISC SDTM 3.1.2 standard consists of 32 domains (in the reference_tables metadata data set) and 723 columns (in the reference_columns metadata data set).
The 32 supported domains are shown in this table.
CDISC SDTM 3.1.2 Supported Domains
Adverse Events - AE
PK Concentrations - PC
Clinical Events - CE
Physical Examination - PE
Concomitant Medications - CM
PK Parameters - PP
Comments - CO
Questionnaires - QS
Drug Accountability - DA
Related Records - RELREC
Demographics - DM
Subject Characteristics - SC
Disposition - DS
Subject Elements - SE
Protocol Deviations - DV
Substance Use - SU
ECG Test Results - EG
Supplemental Qualifiers - AE - SUPPAE
Exposure - EX
Subject Visits - SV
Findings About - FA
Trial Arms - TA
Inclusion/Exclusion Criterion Not Met - IE
Trial Elements - TE
Laboratory Test Results - LB
Trial Inclusion/Exclusion Criteria - TI
Microbiology Specimen - MB
Trial Summary - TS
Medical History - MH
Trial Visits - TV
Microbiology Susceptibility Test - MS
Vital Signs - VS

CDISC SDTM 3.1.3 Reference Standard

Overview of the CDISC SDTM 3.1.3 Domains

The SAS Clinical Standards Toolkit representation of the CDISC SDTM 3.1.3 standard consists of 36 domains (in the reference_tables metadata data set) and 821 columns (in the reference_columns metadata data set).
The 36 supported domains are shown in this table.
CDISC SDTM 3.1.3 Supported Domains
Adverse Events - AE
Clinical Events - CE
Concomitant Medications - CM
Comments - CO
Drug Accountability - DA
Demographics - DM
Disposition - DS
Protocol Deviations - DV
ECG Test Results - EG
Exposure - EX
Findings About - FA
Inclusion/Exclusion Criterion Not Met - IE
Laboratory Test Results - LB
Microbiology Specimen - MB
Medical History - MH
Microbiology Susceptibility - MS
PK Concentrations - PC
Physical Examination - PE
Pool Definition - POOLDEF
PK Parameters - PP
Questionnaire - QS
Related Records - RELREC
Disease Response - RS
Subject Characteristics - SC
Subject Elements - SE
Substance Use - SU
Supplemental Qualifiers - AE - SUPPAE
Subject Visits - SV
Trial Arms - TA
Trial Elements - TE
Trial Inclusion/Exclusion Criteria - TI
Tumor Results - TR
Trial Summary - TS
Tumor Identification - TU
Trial Visits - TV
Vital Signs - VS

CDISC SDTM 3.2 Reference Standard

Overview of the CDISC SDTM 3.2 Domains

The SAS Clinical Standards Toolkit representation of the CDISC SDTM 3.2 standard consists of 57 domains (in the reference_tables metadata data set) and 1284 columns (in the reference_columns metadata data set).
The 57 supported domains are shown in this table.
CDISC SDTM 3.2 Supported Domains
Adverse Events - AE
Morphology - MO
Associated Persons Demographics - APDM
Microbiology Susceptibility - MS
Associated Persons Related to Subjects - APRELSUB
PK Concentrations - PC
Clinical Events - CE
Physical Examination - PE
Concomitant Medications - CM
Pool Definition - POOLDEF
Comments - CO
PK Parameters - PP
Drug Accountability - DA
Procedures - PR
Death Details - DD
Questionnaire - QS
Device Events - DE
Related Records - RELREC
Study Device Identifiers - DI
Related Subjects - RELSUB
Demographics - DM
Reproductive System Findings - RP
Device Properties - DO
Disease Response - RS
Device-Subject Relationships - DR
Subject Characteristics - SC
Disposition - DS
Subject Elements - SE
Device Tracking and Disposition - DT
Skin Response - SR
Device In-Use - DU
Subject Status - SS
Protocol Deviations - DV
Substance Use - SU
Device Exposure - DX
Supplemental Qualifiers - SUPP
Exposure as Collected - EC
Subject Visits - SV
ECG Test Results - EG
Trial Arms - TA
Exposure - EX
Trial Disease Assessments - TD
Findings About - FA
Trial Elements - TE
Healthcare Encounters - HO
Trial Inclusion/Exclusion Criteria - TI
Inclusion/Exclusion Criterion Not Met - IE
Tumor Results - TR
Immunogenicity Specimen Assessment - IS
Trial Summary - TS
Laboratory Test Results - LB
Tumor Identification - TU
Microbiology Specimen - MB
Trial Visits - TV
Medical History - MH
Vital Signs - VS
Microscopic Findings - MI