CDISC SDTM

Purpose

CDISC SDTM defines a standard structure for data tabulations that are submitted as part of a product application to a regulatory authority such as the FDA. The data sets and columns required for a regulatory application are not prescribed by the standard. Instead, these requirements are based on the trial protocol and discussions with the regulatory authority in charge of reviewing the submission. Therefore, any SAS Clinical Standards Toolkit standard, including any CDISC SDTM standard, is only a representative sample or template.

Release Dates

CDISC SDTM 3.1.1
  • CDISC SDTM Model, Final Version 1.1, May 4, 2005
  • CDISC SDTM Implementation Guide, Final Version 3.1.1, September 8, 2005
CDISC SDTM 3.1.2
  • CDISC SDTM Model, Final Version 1.2, November 12, 2008
  • CDISC SDTM Implementation Guide, Final Version 3.1.2, November 12, 2008

CDISC SDTM 3.1.1 Reference Standard

Overview of the CDISC SDTM 3.1.1 Domains

This section lists the 25 domains that are included in the CDISC SDTM 3.1.1 SAS Clinical Standards Toolkit reference standard.
Within these 25 domains, 495 columns have been defined.

Special Purpose Domains

The Special Purpose domains are:
  • Demographics-DM
  • Comments-CO

Interventions Domains

The Interventions domains are:
  • Concomitant Medications-CM
  • Exposure-EX
  • Substance Use-SU

Findings Domains

The Findings domains are:
  • ECG Tests-EG
  • Inclusion/Exclusion Exceptions-IE
  • Laboratory Tests-LB
  • Questionnaires-QS
  • Physical Examinations-PE
  • Subject Characteristics-SC
  • Vital Signs-VS

Events Domains

The Events domains are:
  • Adverse Events-AE
  • Disposition-DS
  • Medical History-MH
  • Protocol Deviations-DV

Trial Design Domains

The Trial Design domains are:
  • Trial Elements-TE
  • Trial Arms-TA
  • Trial Visits-TV
  • Subject Elements-SE
  • Subject Visits-SV
  • Trial Inclusion/Exclusion Criteria-TI
  • Trial Summary-TS

Special Purpose Relationship Data Sets

The special purpose relationship data sets are:
  • Supplemental Qualifiers-SUPPQUAL
  • Related Records-RELREC

Description

CDISC standards allow for the inclusion and exclusion of some columns. (For example, timing variables can be included or excluded.) In addition, CDISC standards do not specify a length for most columns. Therefore, any implementation of a CDISC standard requires interpretation of that standard. This interpretation might lead to differences in the implementation of that standard. Reference standards are derived based on internal conventions and experiences, and discussions with regulatory authorities.
The domain and column metadata that constitute the SAS representation of CDISC SDTM 3.1.1 are derived from the global standards library in these formats:
  • as empty data sets (using the utility macro cst_createTablesForDataStandard)
  • as table metadata (reference_tables in the standard metadata folder)
  • as column metadata for each domain (reference_columns in the standard metadata folder)
The SAS Clinical Standards Toolkit CDISC SDTM reference standard provides metadata and code to validate the structure and content of the SDTM domains.
To enable validation, supplemental files supporting SDTM validation processes include these global standards library files:
  • The Validation Master data set in the validation/control folder contains the super-set of checks validating domain structure and content.
  • The Messages data set in the messages folder provides error messaging for all Validation Master checks.
  • SAS code in the macros folder provides code specific to SDTM that augments code that is provided in the primary SAS Clinical Standards Toolkit autocall library (!sasroot/cstframework/sasmacro).
It is this set of files, in whole or in part, that defines the CDISC SDTM reference standard.

CDISC SDTM 3.1.2 Reference Standard

Overview of the CDISC SDTM 3.1.2 Domains

This section lists the 32 domains that are included in the CDISC SDTM 3.1.2 SAS Clinical Standards Toolkit reference standard.
Within these 32 domains, 723 columns have been defined.

Special Purpose Domains

The Special Purpose domains are:
  • Demographics-DM
  • Comments-CO
  • Subject Elements-SE
  • Subject Visits-SV

Findings Domains

The Findings domains are:
  • Drug Accountability-DA
  • ECG Tests-EG
  • Inclusion/Exclusion Criterion Not Met-IE
  • Laboratory Tests-LB
  • Laboratory Test Results-LB
  • Microbiology Specimen-MB
  • Microbiology Susceptibility Test-MS
  • PK Concentrations-PC
  • Physical Examinations-PE
  • PK Parameters-PP
  • Questionnaires-QS
  • Subject Characteristics-SC
  • Vital Signs-VS

Findings about Domains

The Findings About domain is:
  • Findings About-FA

Events Domains

The Events domains are:
  • Adverse Events-AE
  • Clinical Events-CE
  • Disposition-DS
  • Protocol Deviations-DV
  • Medical History-MH

Interventions Domains

The Interventions domains are:
  • Concomitant Medications-CM
  • Exposure-EX
  • Substance Use-SU

Trial Design Domains

The Trial Design domains are:
  • Trial Arms-TA
  • Trial Elements-TE
  • Trial Inclusion/Exclusion Criteria-TI
  • Trial Summary-TS
  • Trial Visits-TV

Relationship Data Sets

The relationship data sets are:
  • Supplemental Qualifiers-SUPPQUAL
  • Related Records-RELREC

Description

CDISC standards allow for the inclusion and exclusion of some columns. (For example, timing variables can be included or excluded.) CDISC standards do not specify a length for most columns. Therefore, any implementation of a CDISC standard requires interpretation of that standard. This interpretation might lead to differences in the implementation of that standard. Reference standards are derived based on internal conventions and experiences, and discussions with regulatory authorities.
The domain and column metadata that constitute the SAS representation of CDISC SDTM 3.1.2 are derived from the global standards library in these formats:
Sample Reference_Tables Record (CDISC SDTM 3.1.2)
Column Name
Column Value
sasref
REFDATA
table
CE
label
Clinical Events
class
Events
xmlpath
.../transport/ce.xpt
xmltitle
Clinical Events SAS transport file
structure
One record per event per subject
purpose
Tabulation
keys
STUDYID USUBJID CETERM CESTDTC
state
Final
date
November 12, 2008
standard
CDISC-SDTM
standardversion
3.1.2
standardref
comment
Sample Reference_Columns Record (CDISC SDTM 3.1.2)
Column Name
Column Value
sasref
REFDATA
table
SU
column
SUSTRF
label
Start Relative to Reference Period
order
32
type
C
length
20
displayformat
xmldatatype
text
xmlcodelist
STENRF
core
Perm
origin
Derived
role
Timing
term
** BEFORE, DURING, AFTER
algorithm
qualifiers
UPPERCASE
standard
CDISC-SDTM
standardversion
3.1.2
standardref
SDTMIG4.1.4.7
comment
Identifies the start of the substance use period with respect to the sponsor-defined reference period. Sponsors should define the reference period in the study metadata. SUSTRF should be populated when a start date is not collected. If information such as PRIOR, ONGOING, or CONTINUING was collected, then this information should be translated into SUSTRF.
The SAS Clinical Standards Toolkit CDISC SDTM reference standard provides metadata and code to validate the structure and content of the SDTM domains. To enable validation, supplemental files supporting SDTM validation processes include these global standards library files:
  • The Validation Master data set in the validation/control folder contains the super-set of checks validating domain structure and content.
  • The Messages data set in the messages folder provides error messaging for all Validation Master checks.
  • SAS code in the macros folder provides code specific to SDTM that augments code that is provided in the primary SAS Clinical Standards Toolkit autocall library (!sasroot/cstframework/sasmacro).
It is this set of files, in whole or in part, that defines each CDISC SDTM reference standard.