Are you tired of copying PROC FREQ or PROC MEANS output and pasting it into your tables? Do you need to produce summary tables repeatedly? Are you spending a lot of your time generating the same summary tables for different subpopulations? This paper introduces an easy-to-use macro to generate a descriptive statistics table. The table reports counts and percentages for categorical variables, and means, standard deviations, medians, and quantiles for continuous variables. For variables with missing values, the table also includes the count and percentage missing. Customization options allow for the analysis of stratified data, specification of variable output order, and user-defined formats. In addition, this macro incorporates the SAS® Output Delivery System (ODS) to automatically produce a Rich Text Format (RTF) file, which can be further edited by a word processor for the purpose of publication.
Yuanchao Zheng, Stanford University
Jin Long, Stanford University
Maria Montez-Rath, Stanford University
As you know, real world data (RWD) provides highly valuable and practical insights. But as valuable as RWD is, it still has limitations. It is encounter-based, and we are largely blind to what happens between encounters in the health-care system. The encounters generally occur in a clinical setting that might not reflect actual patient experience. Many of the encounters are subjective interviews, observations, or self-reports rather than objective data. Information flow can be slow (even real time is not fast enough in health care anymore). And some data that could be transformative cannot be captured currently. Select Internet of Things (IoT) data can fill the gaps in our current RWD for certain key conditions and provide missing components that are key to conducting Analytics of Healthcare Things (AoHT), such as direct, objective measurements; data collected in usual patient settings rather than artificial clinical settings; data collected continuously in a patient s setting; insights that carry greater weight in Regulatory and Payer decision-making; and insights that lead to greater commercial value. Teradata has partnered with an IoT company whose technology generates unique data for conditions impacted by mobility or activity. This data can fill important gaps and provide new insights that can help distinguish your value in your marketplace. Join us to hear details of successful pilots that have been conducted as well as ongoing case studies.
Joy King, Teradata
Chronic obstructive pulmonary disease (COPD) is the third leading cause of death in the US. An estimated 24 million people suffer from COPD, and the medical cost associated with it stands at a whopping $36 billion. Besides the emotional and physical impact, a patient with COPD has to undergo severe economic burden to pay for the medication. Hospitals are subjected to heavy penalties for high re-admissions. Identifying the best medicine combinations to treat COPD benefits patients and hospitals. This paper deals with analyzing the effectiveness of three popular drugs prescribed for COPD patients in terms of mortality rates and re-admission within 30 days of discharge. The data from Cerner Health Facts consists of over 1 million real-world, anonymized patient records collected in a real-world health environment. Base SAS® is used to perform statistical analysis and data processing; re-admission of patients is analyzed using a lag function. The preliminary results show a re-admission rate of 5.96% and a mortality rate of 3.3% among all patients. The odds ratios computed using logistic regression show an increased mortality rate 2.4 times more for patients using Symbicort compared to Spiriva and Advair. This paper also uses text mining of social media, drug portals, and blogs to gauge the sentiments of patients using these drugs. The results obtained through sentiment analysis are then compared with the statistical analysis to determine the effectiveness of drugs prescribed to the COPD patients.
Indra Kiran Chowdavarapu, Oklahoma State University
Dursun Delen, Oklahoma State University
Vivek Manikandan Damodaran, Oklahoma State University
Epidemiologists and other health scientists are often tasked with solving health problems but find collecting original data prohibitive for a multitude of reasons. For this reason, it is common to instead use secondary data such as that from emergency departments (ED) or inpatient hospital stays. In order to use some of these secondary data sets to study problems over time, it is necessary to link them together using common identifiers and still keep all the unique information about each ED visit or hospitalization. This paper discusses a method that was used to combine five years worth of individual ED visits and five years worth of individual hospitalizations to create a single and (much) larger data set for longitudinal analysis.
Charlotte Baker, Florida A&M University
This presentation discusses the options for including continuous covariates in regression models. In his book, 'Clinical Prediction Models,' Ewout Steyerberg presents a hierarchy of procedures for continuous predictors, starting with dichotomizing the variable and moving to modeling the variable using restricted cubic splines or using a fractional polynomial model. This presentation discusses all of the choices, with a focus on the last two. Restricted cubic splines express the relationship between the continuous covariate and the outcome using a set of cubic polynomials, which are constrained to meet at pre-specified points, called knots. Between the knots, each curve can take on the shape that best describes the data. A fractional polynomial model is another flexible method for modeling a relationship that is possibly nonlinear. In this model, polynomials with noninteger and negative powers are considered, along with the more conventional square and cubic polynomials, and the small subset of powers that best fits the data is selected. The presentation describes and illustrates these methods at an introductory level intended to be useful to anyone who is familiar with regression analyses.
Ruth Croxford, Institute for Clinical Evaluative Sciences
Randomized control trials have long been considered the gold standard for establishing causal treatment effects. Can causal effects be reasonably estimated from observational data too? In observational studies, you observe treatment T and outcome Y without controlling confounding variables that might explain the observed associations between T and Y. Estimating the causal effect of treatment T therefore requires adjustments that remove the effects of the confounding variables. The new CAUSALTRT (causal-treat) procedure in SAS/STAT® 14.2 enables you to estimate the causal effect of a treatment decision by modeling either the treatment assignment T or the outcome Y, or both. Specifically, modeling the treatment leads to the inverse probability weighting methods, and modeling the outcome leads to the regression methods. Combined modeling of the treatment and outcome leads to doubly robust methods that can provide unbiased estimates for the treatment effect even if one of the models is misspecified. This paper reviews the statistical methods that are implemented in the CAUSALTRT procedure and includes examples of how you can use this procedure to estimate causal effects from observational data. This paper also illustrates some other important features of the CAUSALTRT procedure, including bootstrap resampling, covariate balance diagnostics, and statistical graphics.
Michael Lamm, SAS
Yiu-Fai Yung, SAS
The EXPAND procedure is very useful when handling time series data and is commonly used in fields such as finance or economics, but it can also be applied to medical encounter data within a health research setting. Medical encounter data consists of detailed information about healthcare services provided to a patient by a managed care entity and is a rich resource for epidemiologic research. Specific data items include, but are not limited to, dates of service, procedures performed, diagnoses, and costs associated with services provided. Drug prescription information is also available. Because epidemiologic studies generally focus on a particular health condition, a researcher using encounter data might wish to distinguish individuals with the health condition of interest by identifying encounters with a defining diagnosis and/or procedure. In this presentation, I provide two examples of how cases can be identified from a medical encounter database. The first uses a relatively simple case definition, and then I EXPAND the example to a more complex case definition.
Rayna Matsuno, Henry M. Jackson Foundation
Graphics are an excellent way to display results from multiple statistical analyses and get a visual message across to the correct audience. Scientific journals often have very precise requirements for graphs that are submitted with manuscripts. While authors often find themselves using tools other than SAS® to create these graphs, the combination of the SGPLOT procedure and the Output Delivery System enables authors to create what they need in the same place as they conducted their analysis. This presentation focuses on two methods for creating a publication quality graphic in SAS® 9.4 and provides solutions for some issues encountered when doing so.
Charlotte Baker, Florida A&M University
A new ODS destination for creating Microsoft Excel workbooks is available starting in the third maintenance release for SAS® 9.4. This destination creates native Microsoft Excel XLSX files, supports graphic images, and offers other advantages over the older ExcelXP tagset. In this presentation, you learn step-by-step techniques for quickly and easily creating attractive multi-sheet Excel workbooks that contain your SAS® output. The techniques can be used regardless of the platform on which SAS software is installed. You can even use them on a mainframe! Creating and delivering your workbooks on demand and in real time using SAS server technology is discussed. Using earlier versions of SAS to create multi-sheet workbooks is also discussed. Although the title is similar to previous presentations by this author, this presentation contains new and revised material not previously presented.
Vince DelGobbo, SAS
A recurring problem with large research databases containing sensitive information about an individual's health, financial, and personal information is how to make meaningful extracts available to qualified researchers without compromising the privacy of the individuals whose data is in the database. This problem is exacerbated when a large number of extracts need to be made from the database. In addition to using statistical disclosure control methods, this paper recommends limiting the variables included in each extract to the minimum needed and implementing a method of assigning request-specific randomized IDs to each extract that is both secure and self-documenting.
Stanley Legum, Westat
At the end of a project, many institutional review boards (IRBs) require project directors to certify that no personally identifiable information (PII) is retained by a project. This paper briefly reviews what information is considered PII and explores how to identify variables containing PII in a given project. It then shows a comprehensive way to ensure that all SAS® variables containing PII have their values set to NULL and how to use SAS to document that this has been done.
Stanley Legum, Westat
Imagine if you will a program, a program that loves its data, a program that loves its data to be in the same directory as the program itself. Together, in the same directory. True love. The program loves its data so much, it just refers to it by filename. No need to say what directory the data is in; it is the same directory. Now imagine that program being thrust into the world of the server. The server knows not what directory this program resides in. The server is an uncaring, but powerful, soul. Yet, when the program is executing, and the program refers to the data just by filename, the server bellows nay, no path, no data. A knight in shining armor emerges, in the form of a SAS® macro, who says lo, with the help of the SAS® Enterprise Guide® macro variable minions, I can gift you with the location of the program directory and send that with you to yon mighty server. And there was much rejoicing. Yay. This paper shows you a SAS macro that you can include in your SAS Enterprise Guide pre-code to automatically set your present working directory to the same directory where your program is saved on your UNIX or Linux operating system. This is applicable to submitting to any type of server, including a SAS Grid Server. It gives you the flexibility of moving your code and data to different locations without having to worry about modifying the code. It also helps save time by not specifying complete pathnames in your programs. And can't we all use a little more time?
Michelle Buchecker, ThotWave Technologies, LLC.
You might scream in pain or cry with joy that SAS® software can directly produce output in Microsoft Excel as .xlsx workbooks. Excel is an excellent vehicle for delivering large amounts of summary information that needs to be partitioned for human review, exploratory filtering, and sorting. SAS supports ODS EXCEL as a production destination. This paper discusses using the ODS EXCEL statement and the TABULATE and REPORT procedures in the domain of summarizing cross-sectional data extracted from a medical claims database. The discussion covers data preparation, report preparation, and tabulation statements such as CLASS, CLASSLEV, and TABLE. The effects of STYLE options and the TAGATTR suboption for inserting features that are specific to Excel such as formulas, formats, and alignment are covered in detail. A short discussion of reusing these concepts in PROC REPORT statements such as DEFINE, COMPUTE, and CALL DEFINE are also covered.
Richard DeVenezia, Johnson & Johnson
Health care has long been focused on providing reactive care for illness, injury, or chronic conditions. But the rising cost of providing health care has forced many countries, health insurance payers, and health care providers to shift approaches. A new focus on patient value includes providing financial incentives that emphasize clinical outcomes instead of treatments. This focus also means that providers and wellness programs are required to take a segmentation approach to the population under their care, targeting specific people based on their individual risks. This session discusses the benefits of a shift from thinking about health care data as a series of clinical or financial transactions, to one that is centered on patients and their respective clinical conditions. This approach allows for insights pertaining to care delivery processes and treatment patterns, including identification of potentially avoidable complications, variations in care provided, and inefficient care that contributes to waste. All of which contributes to poor clinical outcomes.
Laurie Rose, SAS
Dan Stevens, SAS