Protein Comparison

Table 29.1 shows the variables that are used in this example.

Table 29.1: Variables

Variable Name	Interpretation
`Assign[i,j]`	1 if node $i \in \text {NODES[1]}$ is assigned to node $j \in \text {NODES[2]}$ ; 0 otherwise
`IsCorrespondingEdge[i,j,k,l]`	1 if edge $(i,k) \in \text {EDGES[1]}$ corresponds to edge $(j,l) \in \text {EDGES[2]}$ ; 0 otherwise